Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832246.1_cds_XP_016504827.1_18227
CDS Infomation

[gene=LOC107822773] [db_xref=GeneID:107822773] [protein=protein TIC 56, chloroplastic-like] [protein_id=XP_016504827.1] [location=join(101471..101944,102821..103031,104127..104324,104649..104931,105664..105826,106167..106370)] [gbkey=CDS]
Sequence

ATGGGGTCAGTAAATTTCAACCCGTTCAATAACAACTGGTTCAACAAACCATCAACACCA
TTTCAACCGATTAATCTTTTAACCCATTTTAATTCCCTTAAAACCCAGCAAAATTCCCCA
CCTTTTGCAGCCATTTCAAACCCATTTTCAAGAAAACCCCAAAAAACAGCTCCAGAACAA
CCGGGTCATTACCGGAGAATGCTGGACCAGTTCTACTGGGAATGCGAAACCCGACCAGAC
TTAAGGCACGCACCCAAAGTGGAGAAGATTTTGAACGAGGACCCGATTTTCGAGAAGAAG
GAGAACCCGACTCAGGAAGAGATTGAGGAGAATGACAAATGGTGGGCTGAGTTTAAGGAA
AGCCCAGTGGTCCAGTTCTTGGCCCAAGCTGAAGAGATTGCTGATAAGCTTAACGAGCTT
GAGCTGAAAGAGAATTCTGCTCCTTTTAGAAGTGAAGATAAGAAATTGTGGCAGGCAGTG
CCAAATGTGATTGGATTGGATGGGAGGCCAATGCCCAGAAAAGCGATTAAGACAAAGAAG
GAATCGAATGATAAGTTTTGGGATTTTGCAAGGCAATTCTTTTTTGGGCTTTGGGGATTT
CGTCAACGCCCATACCCACCTGGGAAGCCCATTGATGCTGCACAGGCTATTGGATACAAA
AAGCTTGAAAAGCGATATTATGATTTTATTATGAGGAGCGGTGGGTGGTTTTACAGGGAT
CGATTAGGTCGTTCAAGGGGACCAATGGAATTGATACAACTTAAGACTGCTTGGGGTGCT
GGAATCATTGATAAGCATACTTTCATTTGGGGTGAGGATATGGATGAATGGGCTCCCATT
GGAATGGTTTATGGTCTGGAAAAAGCAATTGCCACTTGGGAAGTTAGATTAGGTGCTGCT
GCTACTGCTTTCCTTCACAAACTACAGAAAGGTATACCTCCTTGGGTTCCTCTCAAAGGA
CATGAGCCGAAGACATATAAGCAGATGCAAGAAGAAGCTTATGAGAGTAAAAGGCGTGAT
TTGGCTGTTTTAGAAGCAAATGATGGTGTATGGTCTGGTGTAAGGACTCCGAGTCATGCC
TTGTTTCTTTGGGCTAGTGGCTCAGAGCTGACATCAATTTTGGAGGCTGACCACATGCCA
AACAAATACATTCCAAAGGATCTTAGGAAAGAATTGGAGAAGGTTATTCCTGGATTGAGG
CCATGGGAGGTTCTAAGTGTTGAACAAGCCATGGATCAAATAACATATGGTGGTGAATGG
TACCGCGAGCCTCTTGGTTCATACACAACGGGCCCTCCATATATTGCTGACTGGAACAAG
GATGTCATGAGATTGTTTGAGATATTCCACGACCTCAGTGTCCAAGTGTACAACAAGATG
GAGAGGACAGTTCCCGGTTTCCGTAAAGTAATGGAGAACGTTGAAATTGATTCTGCTGCT
AGAGAAACTAAAAGGGAGCAGAAGAGGGCTGCTCAGAAGAGAACTGAGGAGGAAATTGCA
TTGTTTGGTCGAGTTCGAAGTGATGATGAGTAA

Peptide Sequence

PEP ID

XP_016504827.1
PEP Infomation

PREDICTED: protein TIC 56, chloroplastic-like [Nicotiana tabacum]
Sequence

MGSVNFNPFNNNWFNKPSTPFQPINLLTHFNSLKTQQNSPPFAAISNPFSRKPQKTAPEQ
PGHYRRMLDQFYWECETRPDLRHAPKVEKILNEDPIFEKKENPTQEEIEENDKWWAEFKE
SPVVQFLAQAEEIADKLNELELKENSAPFRSEDKKLWQAVPNVIGLDGRPMPRKAIKTKK
ESNDKFWDFARQFFFGLWGFRQRPYPPGKPIDAAQAIGYKKLEKRYYDFIMRSGGWFYRD
RLGRSRGPMELIQLKTAWGAGIIDKHTFIWGEDMDEWAPIGMVYGLEKAIATWEVRLGAA
ATAFLHKLQKGIPPWVPLKGHEPKTYKQMQEEAYESKRRDLAVLEANDGVWSGVRTPSHA
LFLWASGSELTSILEADHMPNKYIPKDLRKELEKVIPGLRPWEVLSVEQAMDQITYGGEW
YREPLGSYTTGPPYIADWNKDVMRLFEIFHDLSVQVYNKMERTVPGFRKVMENVEIDSAA
RETKREQKRAAQKRTEEEIALFGRVRSDDE

Transcript Sequence

Gene sequence data has not been registered.